After recovering a Linux instance "PasswordAuthentication" in
the /etc/ssh/sshd.config file changes
from "Yes" to "No".
In order to provide secure access to launched instances, AWS
alters a single directive in the /etc/ssh/sshd_config at launch. AWS
alters this file at launch, regardless of its state on disk or backup.
This prevents any user from using PAM password login. Only ssh public
key authentication (based on the ec2-user key used to launch the
instance) can take place.
Changed Directive (/etc/ssh/sshd_config)
#PasswordAuthentication yes
PasswordAuthentication no
To prevent this issue, you can check "Enable User Data" in the Advanced Options of the Instance Recovery screen, and paste this into User Data:
#!/bin/bash
sed -i "s/^PasswordAuthentication no/PasswordAuthentication yes/" /etc/ssh/sshd_config
systemctl restart sshd